Genomic Location: not available for this species
NR annotation: CAB4012424.1, CDP-alcohol phosphatidyltransferase-domain-containing [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4012424.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8MZC4 | Probable cardiolipin synthase (CMP-forming) OS=Drosophila melanogaster OX=7227 GN=CLS PE=2 SV=1 |
| O13899 | Cardiolipin synthase (CMP-forming) / mitochondrial hydrolase fusion protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=crd1 PE=1 SV=2 |
| O01916 | Cardiolipin synthase (CMP-forming) OS=Caenorhabditis elegans OX=6239 GN=crls-1 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006287 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01066 all species → | CDP-OH_P_transf | CDP-alcohol phosphatidyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050324 all species → | Family | CDP-alcohol phosphatidyltransferase class-I | Interproscan |
| IPR000462 all species → | Family | CDP-alcohol phosphatidyltransferase | Interproscan |
| IPR043130 all species → | Homologous_superfamily | CDP-alcohol phosphatidyltransferase, transmembrane domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14269 all species → | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0032049 all species → | Biological Process | cardiolipin biosynthetic process | Interproscan |
| GO:0043337 all species → | Molecular Function | cardiolipin synthase (CMP-forming) | Interproscan |
| GO:0046474 all species → | Biological Process | glycerophospholipid biosynthetic process | Interproscan |
| GO:0008654 all species → | Biological Process | phospholipid biosynthetic process | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0016780 all species → | Molecular Function | phosphotransferase activity, for other substituted phosphate groups | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K08744 | CRLS; cardiolipin synthase (CMP-forming) | EC:2.7.8.41 | Glycerophospholipid metabolism | ko00564 | deepkoala |
Transcript abundance of CAB4012424.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 5 | 21.39 | 52.30 | |
| apical branchlet · Temperature treatment at T0 | 6 | 5 | 12.62 | 33.46 | |
| apical branchlet · Temperature treatment at T25 | 5 | 1 | 0.18 | 0.88 | |
| apical branchlet · Control at T0 | 4 | 1 | 0.84 | 3.37 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
