Genomic Location: not available for this species
NR annotation: CAB4013173.1, Cytochrome c oxidase assembly COX11, mitochondrial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4013173.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5R7U6 | Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Pongo abelii OX=9601 GN=COX11 PE=3 SV=2 |
| Q9Y6N1 | Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Homo sapiens OX=9606 GN=COX11 PE=1 SV=3 |
| A3KMZ6 | Cytochrome c oxidase assembly protein COX11, mitochondrial OS=Bos taurus OX=9913 GN=COX11 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007503 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04442 all species → | CtaG_Cox11 | Cytochrome c oxidase assembly protein CtaG/Cox11 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023471 all species → | Homologous_superfamily | Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily | Interproscan |
| IPR007533 all species → | Family | Cytochrome c oxidase assembly protein CtaG/Cox11 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21320 all species → | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005507 all species → | Molecular Function | copper ion binding | Interproscan |
| GO:0031304 all species → | Cellular Component | obsolete intrinsic component of mitochondrial inner membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18173 | COA1; cytochrome c oxidase assembly factor 1 | - | Mitochondrial biogenesis | ko03029 | deepkoala |
Transcript abundance of CAB4013173.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
