Gene detail

Detailed information of CAB4013915.1 in Paramuricea clavata

Genomic Location: pcla8_s008319:5672...7895
NR annotation: CAB4013915.1, plasma membrane calcium-transporting ATPase 3-like isoform X1 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A001590

AAACAGCTTGCTGCAAGCGCGGACATATTGAATAAAGCCTGTGTCAGAGATTGCATTTCCACACAAAAAGTGGACAAATTTGTCTTTGCATATAACAAATATTCGCATGTAGGACAAAGGCTACCAGAGGAGTCCGTTCAGCAATACTACATCAGCTTCAAAGGATTTTTTTGCAACATATGAAGTTGGTTCATTCGGACTATTCATTTATGTAAACATATATTCAATCTTCGCAGCGAAAAGTCTGCTTGGCTCAACGCAATATATAGCAAGTGGAAATCCAATGAAGTGTTAAAAGTAGATCTAATATTTCAAATCAAGTCACGAAGTAAGTATTGCAGGTTAGTCCGAATGTCATAGTTCCAGATATGATTGTTGTTTTCATATTAATCTCTTCAAATATAATATAACGTCGAAGGCGTTGTCGGTTGCCATCATTTGCATAATAAATTGATCTAGAATTGTATGTTCTTTGATGTTGGCAGATTCAAGTTTATCTCAAAAGAAATGCCTGTAAAATCATTTATCTTTAAATAGTATACTCAATACTTTAATTTCTGATGTTTTATTTGGCAGTGGTGAAGGCATAGAGCCAGTATTAAGTCGTGcaacatatattttataatagtttGACATCATGGCTACTGGATCGCGTTCGGGCAGTGTTAGCATTGATGAATCTGATGGCCATGTCGTAGATTTTTCTGATATCCCTAAAGAAGATTTGATAGAAGTAATGAAAGGAGGCGAAGATGGCCTACAGTTGCTTCAAGAAAAGTTCGTTAGTATCAATGAAGTTGTTCGTCGTCTGCATAGCTCTGTTGCCCGTGGCATAGAAGGCAACAGTATTAAAGAACGTATGGAGGCATTTGGCTCAAATTACATCCCTCCACAGCCACCAAAAACCTTTTTAGAATTCTTATTCGATGCATTTAAAGATACACTACTTATTATTCTGATGGTAGCTGGTTTGGTTTCGCTTATACTTGGAGTGACTGTCGAAGAAGACAAAAGTACGGCATGGATTGAAGGTTTCGCCATATTTGTCGCTGTCATTATTGTTGCTCTCGTTACTGCTGTAAATGACTATACGAAAGAACAACAATTTCGTGGTTTACAAAATAAAATTGAGGGTGAACACACGTTTACTGTCATCAGAAAGGGTGAGTCATCGTCTATATTTAATGGTGATATTGTTGTTGGTGATATTTGTCAACTGAAATATGGGGATATGATACCTGCAGATGGGCTTCTCGTTCAAAATAATGATCTCAAAATTGATGAAAGTTCACTGACTGGGGAGTCGGATCTTGTGAAGAAAGGCGATGCAAATCCATTTATATTATCTGGTACAAGGGTGATGGAAGGCAGTGGTAAAATGGTAGTCACAGCAGTTGGTATCAACTCTAGATCTGGTCAGATATTGAAACTGTTGGTTTCTGGTGCAGGTGAAGTGAATGCTGCTGGTGCTCAACCACCAgcaacaaaaccaacaaatgGTGATGCTGAAGATGGTGAATTGTTAGAGACGGATCAAACAGATAACGAAAATGAAGACAAAGAAGAAAAATCAATCCTTCAAGCAAAGTTAACAAAGCTTGCTGTCCTGATTGGTTGGTTTGGCCTCGGAGCCGGTATATTAACTGTTATTGTTATCTGGATACGATATTCCATTGAAACATATCATGTTGAAGGTGAATCGTTCCAAAAGAAACATGTGTCTGAATATCTACGAGCATTTATTACTGGTGTCACAGTTCTAGTTGTTGCTGTTCCTGAAGGTCTACCATTAGCGGTGACAATATCCCTTGCTTTCTCTGTCAAGAAAATGTTATTGGACAATAATCTTGTCCGACATTTAGACGCATGTGAAACAATGGGTAATGCAACAGCCATTTGTTCTGACAAGACCGGCACACTCACCACAAATCGTATGACTGTTGTGCAAAGTTACTTGGCAAGAAAATTGGATTGCGTCTTAGAAGCTGACTTCAACTATGAGCAAATTCCTGAAACGTTGCGGCGAACTTTGGTGGAAGGCATTTCATACAACAGTAGTTATGCATCAAGAATTGAGGTAACATTCTCTCTTTACTTTGATAAAATCACAAACGTGAGTGCTAGTGTAAGTACAGATGATTACATATTACACAGTTTATTCACTGAACATCACAAGCTTAGTATCTGTTGGGATACTAAACTCCTCCACTAATTCCTCCACAGA

Protein

Uniprot

Uniprot term	Description
Q98SH2	Plasma membrane calcium-transporting ATPase 1 OS=Gallus gallus OX=9031 GN=ATP2B1 PE=2 SV=2
Q16720	Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens OX=9606 GN=ATP2B3 PE=1 SV=3
Q64568	Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00690	Cation_ATPase_N	Cation transporter/ATPase, N-terminus	Domain	Interproscan
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001757	Family	P-type ATPase	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR004014	Domain	Cation-transporting P-type ATPase, N-terminal	Interproscan
IPR018303	PTM	P-type ATPase, phosphorylation site	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24093	CATION TRANSPORTING ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005388	Molecular Function	P-type calcium transporter activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0051480	Biological Process	regulation of cytosolic calcium ion concentration	Interproscan