Detailed information of CAB4013993.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4013993.1, coatomer subunit beta, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4013993.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23514Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1
A0JN39Coatomer subunit beta OS=Bos taurus OX=9913 GN=COPB1 PE=1 SV=1
Q9JIF7Coatomer subunit beta OS=Mus musculus OX=10090 GN=Copb1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005975 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07718
all species →
Coatamer_beta_CCoatomer beta C-terminal regionDomainInterproscan
PF14806
all species →
Coatomer_b_CplaCoatomer beta subunit appendage platformDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016460
all species →
FamilyCoatomer beta subunit (COPB1)Interproscan
IPR011710
all species →
DomainCoatomer beta subunit, C-terminalInterproscan
IPR029446
all species →
DomainCoatomer beta subunit, appendage platform domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10635
all species →
COATOMER SUBUNIT BETAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0006888
all species →
Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006891
all species →
Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0030126
all species →
Cellular ComponentCOPI vesicle coatInterproscan
GO:0005198
all species →
Molecular Functionstructural molecule activityInterproscan
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4013993.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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