Gene detail

Detailed information of CAB4014878.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4014878.1, RNA-directed DNA polymerase from mobile element jockey, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
B2RXZ1	Poly(A)-specific ribonuclease PNLDC1 OS=Mus musculus OX=10090 GN=Pnldc1 PE=1 SV=1
Q90ZA1	Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1
Q8VDG3	Poly(A)-specific ribonuclease PARN OS=Mus musculus OX=10090 GN=Parn PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04857	CAF1	CAF1 family ribonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006941	Family	Ribonuclease CAF1	Interproscan
IPR051181	Family	CAF1 family poly(A)-specific ribonucleases	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036572	Homologous_superfamily	Doublecortin domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15092	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004535	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan