Genomic Location: not available for this species
NR annotation: CAB4016059.1, CAAX prenyl protease 1 homolog [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4016059.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q80W54 | CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2 |
| O75844 | CAAX prenyl protease 1 homolog OS=Homo sapiens OX=9606 GN=ZMPSTE24 PE=1 SV=2 |
| Q3Y6B8 | CAAX prenyl protease 1 homolog OS=Taenia solium OX=6204 GN=TsSte24p PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006138 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01435 all species → | Peptidase_M48 | Peptidase family M48 | Domain | Interproscan |
| PF16491 all species → | Peptidase_M48_N | CAAX prenyl protease N-terminal, five membrane helices | Domain | Interproscan |
| PF00474 all species → | SSF | Sodium:solute symporter family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001915 all species → | Domain | Peptidase M48 | Interproscan |
| IPR032456 all species → | Domain | CAAX prenyl protease 1, N-terminal | Interproscan |
| IPR001734 all species → | Family | Sodium/solute symporter | Interproscan |
| IPR018212 all species → | Conserved_site | Sodium/solute symporter, conserved site | Interproscan |
| IPR027057 all species → | Family | CAAX prenyl protease 1 | Interproscan |
| IPR038377 all species → | Homologous_superfamily | Sodium/glucose symporter superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10120 all species → | CAAX PRENYL PROTEASE 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004222 all species → | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
| GO:0030176 all species → | Cellular Component | obsolete integral component of endoplasmic reticulum membrane | Interproscan |
| GO:0071586 all species → | Biological Process | CAAX-box protein processing | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0022857 all species → | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:0055085 all species → | Biological Process | transmembrane transport | Interproscan |
| GO:0008233 all species → | Molecular Function | peptidase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06013 | STE24; STE24 endopeptidase | EC:3.4.24.84 | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB4016059.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
