Genomic Location: not available for this species
NR annotation: CAB4016418.1, glutamine synthetase-like [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4016418.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P15105 | Glutamine synthetase OS=Mus musculus OX=10090 GN=Glul PE=1 SV=6 |
| Q9QY94 | Glutamine synthetase OS=Acomys cahirinus OX=10068 GN=GLUL PE=2 SV=3 |
| P15104 | Glutamine synthetase OS=Homo sapiens OX=9606 GN=GLUL PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002165 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00120 all species → | Gln-synt_C | Glutamine synthetase, catalytic domain | Domain | Interproscan |
| PF03951 all species → | Gln-synt_N | Glutamine synthetase, beta-Grasp domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036651 all species → | Homologous_superfamily | Glutamine synthetase, N-terminal domain superfamily | Interproscan |
| IPR027303 all species → | Conserved_site | Glutamine synthetase, glycine-rich site | Interproscan |
| IPR014746 all species → | Homologous_superfamily | Glutamine synthetase/guanido kinase, catalytic domain | Interproscan |
| IPR050292 all species → | Family | Glutamine Synthetase | Interproscan |
| IPR008147 all species → | Domain | Glutamine synthetase, N-terminal domain | Interproscan |
| IPR008146 all species → | Domain | Glutamine synthetase, catalytic domain | Interproscan |
| IPR027302 all species → | Conserved_site | Glutamine synthetase, N-terminal conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20852 all species → | GLUTAMINE SYNTHETASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004356 all species → | Molecular Function | glutamine synthetase activity | Interproscan |
| GO:0006542 all species → | Biological Process | glutamine biosynthetic process | Interproscan |
| GO:0006807 all species → | Biological Process | obsolete nitrogen compound metabolic process | Interproscan |
| GO:0003824 all species → | Molecular Function | catalytic activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01915 | glnA, GLUL; glutamine synthetase | EC:6.3.1.2 | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB4016418.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
