Genomic Location: not available for this species
NR annotation: CAB4017387.1, ras GTPase-activating IQGAP1, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4017387.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P46940 | Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens OX=9606 GN=IQGAP1 PE=1 SV=1 |
| Q9JKF1 | Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2 |
| Q13576 | Ras GTPase-activating-like protein IQGAP2 OS=Homo sapiens OX=9606 GN=IQGAP2 PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002348 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00616 all species → | RasGAP | GTPase-activator protein for Ras-like GTPase | Family | Interproscan |
| PF03836 all species → | RasGAP_C | RasGAP C-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001936 all species → | Domain | Ras GTPase-activating domain | Interproscan |
| IPR023152 all species → | Conserved_site | Ras GTPase-activating protein, conserved site | Interproscan |
| IPR008936 all species → | Homologous_superfamily | Rho GTPase activation protein | Interproscan |
| IPR000593 all species → | Domain | RasGAP protein, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14149 all species → | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0043087 all species → | Biological Process | regulation of GTPase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005096 all species → | Molecular Function | GTPase activator activity | Interproscan |
| GO:0005516 all species → | Molecular Function | calmodulin binding | Interproscan |
| GO:0005938 all species → | Cellular Component | cell cortex | Interproscan |
| GO:0051015 all species → | Molecular Function | actin filament binding | Interproscan |
| GO:1903479 all species → | Biological Process | mitotic actomyosin contractile ring assembly actin filament organization | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K05767 | IQGAP2_3; Ras GTPase-activating-like protein IQGAP2/3 | - | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB4017387.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
