Genomic Location: not available for this species
NR annotation: CAB4017530.1, syndetin isoform X2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4017530.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8CI71 | Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2 |
| Q96JG6 | Syndetin OS=Homo sapiens OX=9606 GN=VPS50 PE=1 SV=3 |
| F1LSG8 | Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003524 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10475 all species → | Vps54_N | Vacuolar-sorting protein 54, of GARP complex | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019515 all species → | Domain | Vacuolar protein sorting-associated protein 54, N-terminal | Interproscan |
| IPR040047 all species → | Family | Syndetin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13258 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000149 all species → | Molecular Function | SNARE binding | Interproscan |
| GO:0032456 all species → | Biological Process | endocytic recycling | Interproscan |
| GO:0042147 all species → | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| GO:1990745 all species → | Cellular Component | EARP complex | Interproscan |
CAB4017530.1.
