Gene detail

Detailed information of CAB4017897.1 in Paramuricea clavata

Genomic Location: pcla8_s010104:6478...9000
NR annotation: CAB4017897.1, phosphatase 1 regulatory subunit 3C [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A066455

GCCGATCTTTGTTATATAACAAACTTTGGCAAGGAATATGAAACATTTCGAGTCGAGGAGCTTACATAGATTAGATGTAAGGCTGTGAAGTGACAGACTATGTTATTACACGCGAGGCCGGCAAGTCACACTGGTGAAAGTTTTACAAACAAATTGACGAGCTGTAATATGGCAGTCGATTGGTCAACGAAGCAAATCACCACAGTCGATTCTACACCAAGAAAATCCGTACATTTTGCCGATACTAAAGGACTCGCGTTAGTCTCGACATTTTTCTTTACTGCGGAAAAGACGTCGCTGGAAACGGTCAGGGAGCGAGAGCAGTTTGGACGAATAACAACGGCATTTAGAAAATTACGACAGGCGAAAGGAGAGCGAGTTAGGTTACTGAATTATAAGTCGCCGGTCCCTACTAGAGAATTTGAAGAGAATATACAAAAGAATAATGTATGCTTAGAGAAAACTTATTGCAACAGAAACGGAGTGTACGGTCGCATACAAGTCAAGAATATCGCATATGAGAAAGACGTAACTGTGAGATCTACTTTCGATTCGTGGGCGACATGCAGAGACCAGACAGCGAACTATATTCCAGGAGCAAGTGTTGGAGATTCAGATACATTCTTCTTTCACATTACTCCTCCTGTTAGCGCCGCAGAACAGAGAATGGAGTTTGCAATTTGCTACAGAGTAAACGGGAAAACTTTCTGGGATAATAACTTTGGTGATAACTATAGACTGCTCTATTTACCATCATGAGAATTAATTGCAACATCCCGCAACAGCGGTGTCCTTTAAAGTTCACGCAGTAATAACAGAGGGGGCAGAGAATGAAAGGAGTTTCAGACAATTTACGTCAATCACAGGGCGAGGTATCCTAGCTGCTTCCTGGTTCTTGAAGTGAGACGGAATTAAATTATGaaattattgtatatacagcaaactatatttattattttagtataatattattttaaagtGTATATGTAATTATGCTGATGTGTTGCAGTGTTATTAAAATGAGCTTTGTACAGCTTGTACACAAATATTGTCATTAGTTATGTTATACATCATtaactgtatactgtatatagttaCATTGGACTTTGATAACTTGCTTTGATAATAGCATGTACAGCACGTGAAGCGGAAGTGTTGTTCACATGATTGGtattaaagccggttttccaccagGCGAAATTGTTCGCGCGAAGTACTGAACTCTATTTgagttgaaacatagttggaacactcatcaaatcCTTATTTTGTTAATCCAGAAATGTCCCCCGTAACAATGTGTGACTGCCAAACAAAAAGAAAGTCGCTTTGCACAAATTTAGACTcaacacgcaaaaatctcacatcttgcaacaagtctgccaacaagctgtcaacaagttgtattcgCACTGGTTGTcccaagctgtcaacaagtttggaacaagctgttaacaacttgtaacaatcttgttgatattatcagacttgttgcaaggttgttccaacaagtccaatacaatcatgatataacaatgttgctacaaccttgtgtcgtcaaccttgtaacattcttgttatatcattactgtatcagacttgtcagaacaaccttgtaacaagtctgataatgccatcaagcttgttacaagttattaacagcttgttccaaatttgttacaacaactgggaacaagcagtgcgaacacaaattgtcgacagcttgtgaacagatttgtaacaacttgtttgcaggcTTGTGACAACTTGTGCGTTCTTATGTGTGTAGTGGGAAACATGGGGAAAATGTTCTCCTACAGCGCTAATGGTCAGATCGATCAAATTGCTATAAATGGAATACAAAACTCTAGTCTATAGAGAATGGTCTGATATAGCCTTAATTTTAGAGGGCCAATTCTGAGCGgaagttttaaattaaatttccaAAAACCTTTTCCCAGTCAAAGATCTTTCTTTGAAAGTAGAAACAAAAATACTGCTTCCACTGGCTTTATCATGTAAATAGGAATCGCACCTAAAACGTACGTTCCAAAACCAGAGTTAACACGGCCAGTCTTTCACTCCCAAAACTTCTAGCTTTTGCCGATTGCGTGTATTTTTCAACCGACTAAGAATCGTTGTTGAAGTGGAATTAACGGAAAATCACGCCCTGGACCTTGTCAACTGCTATAAGCAAATATATTTAAGTACCAGTATTTTGGCGGCTAAACTGTTTTCGCGAGTTTTCCGTTGGTGTATCCGTTACATTTTTCCGAAAACACTCGACTCCTGTGGCCCTTGCGTGCAACAGTGTCAGTACGAAATAAACTAGTCCCGAATAAAAGTTGAAATTTAAGATTTGAGAAGAGGAGACAATGGGTAATTCCagctgtagactaaattttgatcaatgcaagaagaacaaaatccaaccACAGTTAGAGAAGAGCGTCTTAGACTAGACACAGCTAGAAAGAAAGTCTtggaatgagtaaaactgcaaagattggttgctaaatgttg

Protein

Uniprot

Uniprot term	Description
Q9UQK1	Protein phosphatase 1 regulatory subunit 3C OS=Homo sapiens OX=9606 GN=PPP1R3C PE=1 SV=2
Q7TMB3	Protein phosphatase 1 regulatory subunit 3C OS=Mus musculus OX=10090 GN=Ppp1r3c PE=1 SV=1
Q803M0	Protein phosphatase 1 regulatory subunit 3B OS=Danio rerio OX=7955 GN=ppp1r3b PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03370	CBM_21	Carbohydrate/starch-binding module (family 21)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005036	Domain	CBM21 (carbohydrate binding type-21) domain	Interproscan
IPR050782	Family	Protein phosphatase 1 regulatory subunit 3	Interproscan
IPR038175	Homologous_superfamily	CBM21 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12307	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000164	Cellular Component	protein phosphatase type 1 complex	Interproscan
GO:0005979	Biological Process	regulation of glycogen biosynthetic process	Interproscan
GO:0008157	Molecular Function	protein phosphatase 1 binding	Interproscan
GO:2001069	Molecular Function	glycogen binding	Interproscan