Genomic Location: not available for this species
NR annotation: CAB4018191.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4018191.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000015 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03638 all species → | TCR | Tesmin/TSO1-like CXC domain, cysteine-rich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005172 all species → | Domain | CRC domain | Interproscan |
| IPR033467 all species → | Domain | Tesmin/TSO1-like CXC domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46704 all species → | CXC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
CAB4018191.1. This gene does have a gene model — the search simply returned no hit.CAB4018191.1.Transcript abundance of CAB4018191.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 1 | 0.00 | 0.03 | |
| apical branchlet · Temperature treatment at T0 | 6 | 1 | 0.00 | 0.01 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
