Genomic Location: not available for this species
NR annotation: CAB4019122.1, solute carrier family 40 member 1, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4019123.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9I9R3 | Solute carrier family 40 member 1 OS=Danio rerio OX=7955 GN=slc40a1 PE=1 SV=3 |
| E2RFJ3 | Ferroportin OS=Canis lupus familiaris OX=9615 GN=SLC40A1 PE=3 SV=3 |
| Q9NP59 | Ferroportin OS=Homo sapiens OX=9606 GN=SLC40A1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005248 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06963 all species → | FPN1 | Ferroportin1 (FPN1) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009716 all species → | Family | Ferroportin-1 | Interproscan |
| IPR036259 all species → | Homologous_superfamily | MFS transporter superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11660 all species → | SOLUTE CARRIER FAMILY 40 MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005381 all species → | Molecular Function | iron ion transmembrane transporter activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0034755 all species → | Biological Process | iron ion transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K14685 | SLC40A1, FPN1; solute carrier family 40 (iron-regulated transporter), member 1 | - | Transporters | ko02000 | deepkoala |
Transcript abundance of CAB4019123.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
