Genomic Location: not available for this species
NR annotation: CAB4019391.1, lethal(2) giant larvae homolog 1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4019391.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q15334 | Lethal(2) giant larvae protein homolog 1 OS=Homo sapiens OX=9606 GN=LLGL1 PE=1 SV=3 |
| Q80Y17 | Lethal(2) giant larvae protein homolog 1 OS=Mus musculus OX=10090 GN=Llgl1 PE=1 SV=1 |
| Q8K4K5 | Lethal(2) giant larvae protein homolog 1 OS=Rattus norvegicus OX=10116 GN=Llgl1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003607 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08596 all species → | Lgl_C | Lethal giant larvae(Lgl) like, C-terminal | Repeat | Interproscan |
| PF08366 all species → | LLGL | LLGL2 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000664 all species → | Family | Lethal(2) giant larvae protein | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR013905 all species → | Domain | Lethal giant larvae (Lgl)-like, C-terminal domain | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR013577 all species → | Domain | Lethal giant larvae homologue 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10241 all species → | LETHAL 2 GIANT LARVAE PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005096 all species → | Molecular Function | GTPase activator activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0008593 all species → | Biological Process | regulation of Notch signaling pathway | Interproscan |
| GO:0019905 all species → | Molecular Function | syntaxin binding | Interproscan |
| GO:0030864 all species → | Cellular Component | cortical actin cytoskeleton | Interproscan |
| GO:0030866 all species → | Biological Process | cortical actin cytoskeleton organization | Interproscan |
| GO:0032878 all species → | Biological Process | regulation of establishment or maintenance of cell polarity | Interproscan |
| GO:0045159 all species → | Molecular Function | myosin II binding | Interproscan |
| GO:0050708 all species → | Biological Process | regulation of protein secretion | Interproscan |
| GO:0051294 all species → | Biological Process | establishment of spindle orientation | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K06094 | LLGL; lethal(2) giant larvae protein | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of CAB4019391.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
