Detailed information of CAB4019690.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4019690.1, 60S ribosomal L4-1, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4019690.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49691Large ribosomal subunit protein uL4y OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2
Q9SF40Large ribosomal subunit protein uL4z OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1
P08429Large ribosomal subunit protein uL4A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006123 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14374
all species →
Ribos_L4_asso_C60S ribosomal protein L4 C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023574
all species →
Homologous_superfamilyLarge ribosomal subunit protein uL4 domain superfamilyInterproscan
IPR045240
all species →
FamilyLarge ribosomal subunit protein uL4, eukaryotic and archaeal typeInterproscan
IPR025755
all species →
DomainLarge ribosomal subunit protein uL4, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19431
all species →
60S RIBOSOMAL PROTEIN L4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →
Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →
Cellular ComponentribosomeInterproscan
GO:0006412
all species →
Biological ProcesstranslationInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0022625
all species →
Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4019690.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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