Genomic Location: not available for this species
NR annotation: CAB4019851.1, Selenide, water dikinase [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4019851.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O18373 | Inactive selenide, water dikinase-like protein OS=Drosophila melanogaster OX=7227 GN=Sps1 PE=2 SV=1 |
| P97364 | Selenide, water dikinase 2 OS=Mus musculus OX=10090 GN=Sephs2 PE=1 SV=3 |
| Q99611 | Selenide, water dikinase 2 OS=Homo sapiens OX=9606 GN=SEPHS2 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007768 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02769 all species → | AIRS_C | AIR synthase related protein, C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010918 all species → | Domain | PurM-like, C-terminal domain | Interproscan |
| IPR036676 all species → | Homologous_superfamily | PurM-like, C-terminal domain superfamily | Interproscan |
| IPR004536 all species → | Family | Selenophosphate synthetase | Interproscan |
| IPR036921 all species → | Homologous_superfamily | PurM-like, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10256 all species → | SELENIDE, WATER DIKINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004756 all species → | Molecular Function | selenide, water dikinase activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016260 all species → | Biological Process | selenocysteine biosynthetic process | Interproscan |
CAB4019851.1.Transcript abundance of CAB4019851.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
