Genomic Location: not available for this species
NR annotation: CAB4019958.1, peroxisomal NADH pyrophosphatase NUDT12 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4019958.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q29RH3 | NAD-capped RNA hydrolase NUDT12 OS=Bos taurus OX=9913 GN=NUDT12 PE=2 SV=1 |
| Q9DCN1 | NAD-capped RNA hydrolase NUDT12 OS=Mus musculus OX=10090 GN=Nudt12 PE=1 SV=1 |
| Q4R7L8 | NAD-capped RNA hydrolase NUDT12 OS=Macaca fascicularis OX=9541 GN=NUDT12 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0011626 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09296 all species → | NUDIX-like | NADH pyrophosphatase-like rudimentary NUDIX domain | Domain | Interproscan |
| PF00293 all species → | NUDIX | NUDIX domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050241 all species → | Family | NAD-capped RNA hydrolase NudC subfamily | Interproscan |
| IPR020084 all species → | Conserved_site | NUDIX hydrolase, conserved site | Interproscan |
| IPR049734 all species → | Domain | NADH pyrophosphatase-like, Nudix hydrolase C-terminal domain | Interproscan |
| IPR000086 all species → | Domain | NUDIX hydrolase domain | Interproscan |
| IPR015375 all species → | Domain | NADH pyrophosphatase-like, N-terminal | Interproscan |
| IPR015797 all species → | Homologous_superfamily | NUDIX hydrolase-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42904 all species → | NUDIX HYDROLASE, NUDC SUBFAMILY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005777 all species → | Cellular Component | peroxisome | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006734 all species → | Biological Process | NADH metabolic process | Interproscan |
| GO:0006742 all species → | Biological Process | NADP catabolic process | Interproscan |
| GO:0019677 all species → | Biological Process | NAD catabolic process | Interproscan |
| GO:0035529 all species → | Molecular Function | NADH pyrophosphatase activity | Interproscan |
| GO:0016787 all species → | Molecular Function | hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03426 | NUDT12_13, nudC; NAD+ diphosphatase | EC:3.6.1.22 | Peroxisome | ko04146 | deepkoala |
Transcript abundance of CAB4019958.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
