Gene detail

Detailed information of CAB4019984.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4019984.1, myosin heavy fast skeletal muscle, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P10978	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14214	Helitron_like_N	Helitron helicase-like domain at N-terminus	Family	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR025476	Domain	Helitron helicase-like domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR051055	Family	PIF1 DNA helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47642	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22611	SART3, TIP110; squamous cell carcinoma antigen recognized by T-cells 3	-	Chromosome and associated proteins	ko03036	deepkoala