Gene detail

Detailed information of CAB4020463.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4020463.1, U2 snRNP-associated SURP motif-containing -like, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5R7X2	U2 snRNP-associated SURP motif-containing protein OS=Pongo abelii OX=9601 GN=U2SURP PE=2 SV=1
O15042	U2 snRNP-associated SURP motif-containing protein OS=Homo sapiens OX=9606 GN=U2SURP PE=1 SV=2
Q6NV83	U2 snRNP-associated SURP motif-containing protein OS=Mus musculus OX=10090 GN=U2surp PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01805	Surp	Surp module	Family	Interproscan
PF04818	CID	CID domain	Repeat	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035967	Homologous_superfamily	SWAP/Surp superfamily	Interproscan
IPR006569	Domain	CID domain	Interproscan
IPR000061	Domain	SWAP/Surp	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR051485	Family	SR-related and CTD-associated factor	Interproscan
IPR035009	Domain	SR140, RNA recognition motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23140	RNA PROCESSING PROTEIN LD23810P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12842	SR140; U2-associated protein SR140	-	Spliceosome	ko03041	deepkoala