Genomic Location: not available for this species
NR annotation: CAB4020560.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4020560.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| F6S9E6 | Dynein axonemal assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=dnaaf3 PE=3 SV=2 |
| Q32NQ7 | Dynein axonemal assembly factor 3 OS=Xenopus laevis OX=8355 GN=dnaaf3 PE=2 SV=1 |
| Q3UYV8 | Dynein axonemal assembly factor 3 OS=Mus musculus OX=10090 GN=Dnaaf3 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004926 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF14737 all species → | DUF4470 | Domain of unknown function (DUF4470) | Family | Interproscan |
| PF14740 all species → | DUF4471 | Domain of unknown function (DUF4471) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039304 all species → | Family | Dynein assembly factor 3, axonemal | Interproscan |
| IPR027974 all species → | Domain | Domain of unknown function DUF4470 | Interproscan |
| IPR028235 all species → | Domain | Dynein assembly factor 3, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22118 all species → | DYNEIN ASSEMBLY FACTOR 3, AXONEMAL | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0044458 all species → | Biological Process | motile cilium assembly | Interproscan |
| GO:0070286 all species → | Biological Process | axonemal dynein complex assembly | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19752 | DNAAF3, PF22; dynein axonemal assembly factor 3 | - | Cytoskeleton proteins | ko04812 | deepkoala |
Transcript abundance of CAB4020560.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
