Detailed information of CAB4020847.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4020847.1, Splicing factor 3A subunit 1, partial [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4020847.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8K4Z5Splicing factor 3A subunit 1 OS=Mus musculus OX=10090 GN=Sf3a1 PE=1 SV=1
Q15459Splicing factor 3A subunit 1 OS=Homo sapiens OX=9606 GN=SF3A1 PE=1 SV=1
A2VDN6Splicing factor 3A subunit 1 OS=Bos taurus OX=9913 GN=SF3A1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005100 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01805
all species →		SurpSurp moduleFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000061
all species →		DomainSWAP/SurpInterproscan
IPR035967
all species →		Homologous_superfamilySWAP/Surp superfamilyInterproscan
IPR045146
all species →		FamilySplicing factor 3A subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15316
all species →		SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0000381
all species →		Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0005686
all species →		Cellular ComponentU2 snRNPInterproscan
GO:0045292
all species →		Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071004
all species →		Cellular ComponentU2-type prespliceosomeInterproscan
GO:0071013
all species →		Cellular Componentcatalytic step 2 spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4020847.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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