Genomic Location: not available for this species
NR annotation: CAB4022155.1, chromatin accessibility complex 1, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4022155.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9JKP8 | Chromatin accessibility complex protein 1 OS=Mus musculus OX=10090 GN=Chrac1 PE=1 SV=1 |
| Q9NRG0 | Chromatin accessibility complex protein 1 OS=Homo sapiens OX=9606 GN=CHRAC1 PE=1 SV=1 |
| Q9CQ36 | DNA polymerase epsilon subunit 4 OS=Mus musculus OX=10090 GN=Pole4 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002445 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00808 all species → | CBFD_NFYB_HMF | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009072 all species → | Homologous_superfamily | Histone-fold | Interproscan |
| IPR050568 all species → | Family | Transcription and DNA Replication Regulators | Interproscan |
| IPR003958 all species → | Domain | Transcription factor CBF/NF-Y/archaeal histone domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10252 all species → | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046982 all species → | Molecular Function | protein heterodimerization activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006261 all species → | Biological Process | DNA-templated DNA replication | Interproscan |
| GO:0006338 all species → | Biological Process | chromatin remodeling | Interproscan |
| GO:0008623 all species → | Cellular Component | CHRAC | Interproscan |
CAB4022155.1.Transcript abundance of CAB4022155.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
