Genomic Location: not available for this species
NR annotation: CAB4022365.1, transcription factor AP-2-delta [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4022365.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5RJ20 | Transcription factor AP-2-delta OS=Danio rerio OX=7955 GN=tfap2d PE=2 SV=1 |
| Q7Z6R9 | Transcription factor AP-2-delta OS=Homo sapiens OX=9606 GN=TFAP2D PE=1 SV=1 |
| Q91ZK0 | Transcription factor AP-2-delta OS=Mus musculus OX=10090 GN=Tfap2d PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004315 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03299 all species → | TF_AP-2 | Transcription factor AP-2 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013854 all species → | Domain | Transcription factor AP-2, C-terminal | Interproscan |
| IPR004979 all species → | Family | Transcription factor AP-2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10812 all species → | TRANSCRIPTION FACTOR AP-2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000977 all species → | Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0003700 all species → | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0042127 all species → | Biological Process | regulation of cell population proliferation | Interproscan |
| GO:0048856 all species → | Biological Process | anatomical structure development | Interproscan |
CAB4022365.1.Transcript abundance of CAB4022365.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
