Genomic Location: not available for this species
NR annotation: CAB4022583.1, extended synaptotagmin-2-like isoform X2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4022584.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q3TZZ7 | Extended synaptotagmin-2 OS=Mus musculus OX=10090 GN=Esyt2 PE=1 SV=1 |
| A0FGR8 | Extended synaptotagmin-2 OS=Homo sapiens OX=9606 GN=ESYT2 PE=1 SV=1 |
| Q5M7N9 | Extended synaptotagmin-3 OS=Xenopus tropicalis OX=8364 GN=esyt3 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001220 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00168 all species → | C2 | C2 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR035892 all species → | Homologous_superfamily | C2 domain superfamily | Interproscan |
| IPR000008 all species → | Domain | C2 domain | Interproscan |
| IPR051634 all species → | Family | Extended Synaptotagmin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45761 all species → | EXTENDED SYNAPTOTAGMIN-LIKE PROTEIN 2, ISOFORM C | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0005544 all species → | Molecular Function | calcium-dependent phospholipid binding | Interproscan |
| GO:0008429 all species → | Molecular Function | phosphatidylethanolamine binding | Interproscan |
| GO:0031210 all species → | Molecular Function | phosphatidylcholine binding | Interproscan |
| GO:0031227 all species → | Cellular Component | obsolete intrinsic component of endoplasmic reticulum membrane | Interproscan |
| GO:0031234 all species → | Cellular Component | extrinsic component of cytoplasmic side of plasma membrane | Interproscan |
| GO:0035091 all species → | Molecular Function | phosphatidylinositol binding | Interproscan |
CAB4022584.1.Transcript abundance of CAB4022584.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
