Genomic Location: not available for this species
NR annotation: CAB4022622.1, Immunoglobulin-binding 1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4022622.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P78318 | Immunoglobulin-binding protein 1 OS=Homo sapiens OX=9606 GN=IGBP1 PE=1 SV=1 |
| Q61249 | Immunoglobulin-binding protein 1 OS=Mus musculus OX=10090 GN=Igbp1 PE=1 SV=1 |
| O08836 | Immunoglobulin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Igbp1 PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005054 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04177 all species → | TAP42 | TAP42-like family | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007304 all species → | Family | TAP46-like protein | Interproscan |
| IPR038511 all species → | Homologous_superfamily | TAP42/TAP46-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10933 all species → | IMMUNOGLOBULIN-BINDING PROTEIN 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0009966 all species → | Biological Process | regulation of signal transduction | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0035303 all species → | Biological Process | regulation of dephosphorylation | Interproscan |
| GO:0051721 all species → | Molecular Function | protein phosphatase 2A binding | Interproscan |
CAB4022622.1.Transcript abundance of CAB4022622.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
