Genomic Location: not available for this species
NR annotation: CAB4022796.1, exportin-2-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4022797.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9PTU3 | Exportin-2 OS=Pagrus major OX=143350 GN=cse1l PE=2 SV=1 |
| Q7SZC2 | Exportin-2 OS=Danio rerio OX=7955 GN=cse1l PE=1 SV=2 |
| Q8AY73 | Exportin-2 OS=Oreochromis niloticus OX=8128 GN=cse1l PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004691 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03378 all species → | CAS_CSE1 | CAS/CSE protein, C-terminus | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 all species → | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 all species → | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR005043 all species → | Domain | Exportin-2, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10997 all species → | IMPORTIN-7, 8, 11 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005049 all species → | Molecular Function | nuclear export signal receptor activity | Interproscan |
| GO:0005635 all species → | Cellular Component | nuclear envelope | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006606 all species → | Biological Process | protein import into nucleus | Interproscan |
| GO:0006611 all species → | Biological Process | protein export from nucleus | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0031267 all species → | Molecular Function | small GTPase binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K18423 | CSE1, CAS, XPO2; exportin-2 (importin alpha re-exporter) | - | Chromosome and associated proteins | ko03036 | deepkoala |
Transcript abundance of CAB4022797.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
