Gene detail

Detailed information of CAB4022809.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4022809.1, myelin regulatory factor-like isoform X3 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

Sequence

No sequence record for CAB4022809.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3UR85	Myelin regulatory factor OS=Mus musculus OX=10090 GN=Myrf PE=1 SV=2
Q9Y2G1	Myelin regulatory factor OS=Homo sapiens OX=9606 GN=MYRF PE=1 SV=3
Q66IV1	Myelin regulatory factor OS=Xenopus laevis OX=8355 GN=myrf PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005322 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13887 all species →	MYRF_ICA	Myelin regulatory factor ICA domain	Domain	Interproscan
PF05224 all species →	NDT80_PhoG	NDT80 / PhoG like DNA-binding family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026932 all species →	Domain	Myelin gene regulatory factor, ICA domain	Interproscan
IPR051577 all species →	Family	Myelin Regulatory Factor-like	Interproscan
IPR024061 all species →	Domain	NDT80 DNA-binding domain	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13029 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016540 all species →	Biological Process	protein autoprocessing	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for CAB4022809.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.