Genomic Location: not available for this species
NR annotation: CAB4023622.1, ceramide synthase 5 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4023622.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q8N5B7 | Ceramide synthase 5 OS=Homo sapiens OX=9606 GN=CERS5 PE=1 SV=1 |
| Q8C172 | Ceramide synthase 6 OS=Mus musculus OX=10090 GN=Cers6 PE=1 SV=1 |
| Q6ZMG9 | Ceramide synthase 6 OS=Homo sapiens OX=9606 GN=CERS6 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002351 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03798 all species → | TRAM_LAG1_CLN8 | TLC domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR016439 all species → | Family | Sphingosine N-acyltransferase Lag1/Lac1-like | Interproscan |
| IPR006634 all species → | Domain | TRAM/LAG1/CLN8 homology domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12560 all species → | LONGEVITY ASSURANCE FACTOR 1 LAG1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046513 all species → | Biological Process | ceramide biosynthetic process | Interproscan |
| GO:0050291 all species → | Molecular Function | sphingosine N-acyltransferase activity | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
CAB4023622.1.Transcript abundance of CAB4023622.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
