Genomic Location: not available for this species
NR annotation: CAB4024196.1, centrosomal of 290 kDa-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4024196.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q9TU23 | Centrosomal protein of 290 kDa (Fragment) OS=Bos taurus OX=9913 GN=CEP290 PE=1 SV=2 |
| O15078 | Centrosomal protein of 290 kDa OS=Homo sapiens OX=9606 GN=CEP290 PE=1 SV=2 |
| Q6A078 | Centrosomal protein of 290 kDa OS=Mus musculus OX=10090 GN=Cep290 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002535 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16574 all species → | CEP209_CC5 | Coiled-coil region of centrosome protein CE290 | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR026201 all species → | Family | Centrosomal protein of 290kDa | Interproscan |
| IPR032321 all species → | Domain | Centrosomal protein of 290kDa, coiled-coil region | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18879 all species → | CENTROSOMAL PROTEIN OF 290 KDA | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0034451 all species → | Cellular Component | centriolar satellite | Interproscan |
| GO:0035869 all species → | Cellular Component | ciliary transition zone | Interproscan |
| GO:0097711 all species → | Biological Process | ciliary basal body-plasma membrane docking | Interproscan |
| GO:1905349 all species → | Biological Process | ciliary transition zone assembly | Interproscan |
| GO:1905515 all species → | Biological Process | non-motile cilium assembly | Interproscan |
CAB4024196.1.Transcript abundance of CAB4024196.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
