Detailed information of CAB4024298.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4024298.1, alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4024298.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96Q83Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Homo sapiens OX=9606 GN=ALKBH3 PE=1 SV=1
Q32L00Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Bos taurus OX=9913 GN=ALKBH3 PE=2 SV=1
Q8K1E6Alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 OS=Mus musculus OX=10090 GN=Alkbh3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007035 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13532
all species →		2OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032854
all species →		FamilyAlkylated DNA repair protein alkB homologue 3Interproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR037151
all species →		Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR027450
all species →		DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31212
all species →		ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006307
all species →		Biological ProcessDNA alkylation repairInterproscan
GO:0035552
all species →		Biological Processobsolete oxidative single-stranded DNA demethylationInterproscan
GO:0051213
all species →		Molecular Functiondioxygenase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10860ALKBH3, DEPC1; mRNA N1-methyladenine demethylaseEC:1.14.11.54
DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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