Genomic Location: not available for this species
NR annotation: CAB4024597.1, 3-hydroxyisobutyryl- hydrolase, mitochondrial-like isoform X2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4024597.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q5XIE6 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibch PE=1 SV=2 |
| A2VDC2 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis OX=8355 GN=hibch PE=2 SV=1 |
| Q28FR6 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis OX=8364 GN=hibch PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003622 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16113 all species → | ECH_2 | Enoyl-CoA hydratase/isomerase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029045 all species → | Homologous_superfamily | ClpP/crotonase-like domain superfamily | Interproscan |
| IPR045004 all species → | Domain | Enoyl-CoA hydratase/isomerase domain | Interproscan |
| IPR032259 all species → | Family | Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43176 all species → | 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003860 all species → | Molecular Function | 3-hydroxyisobutyryl-CoA hydrolase activity | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006574 all species → | Biological Process | valine catabolic process | Interproscan |
CAB4024597.1.Transcript abundance of CAB4024597.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
