Genomic Location: not available for this species
NR annotation: CAB4025248.1, glucosylceramidase-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4025248.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| P17439 | Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba1 PE=1 SV=1 |
| Q2KHZ8 | Lysosomal acid glucosylceramidase OS=Bos taurus OX=9913 GN=GBA1 PE=2 SV=1 |
| Q70KH2 | Lysosomal acid glucosylceramidase OS=Sus scrofa OX=9823 GN=GBA1 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003972 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02055 all species → | Glyco_hydro_30 | Glycosyl hydrolase family 30 TIM-barrel domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001139 all species → | Family | Glycoside hydrolase family 30 | Interproscan |
| IPR033453 all species → | Domain | Glycosyl hydrolase family 30, TIM-barrel domain | Interproscan |
| IPR017853 all species → | Homologous_superfamily | Glycoside hydrolase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11069 all species → | GLUCOSYLCERAMIDASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004348 all species → | Molecular Function | glucosylceramidase activity | Interproscan |
| GO:0006665 all species → | Biological Process | sphingolipid metabolic process | Interproscan |
| GO:0006680 all species → | Biological Process | glucosylceramide catabolic process | Interproscan |
CAB4025248.1.Transcript abundance of CAB4025248.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
