Detailed information of CAB4025528.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4025528.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4025528.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DEF4LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1
Q3B7I8LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1
Q8IV50LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LYSMD2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008538 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01476
all species →		LysMLysM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036779
all species →		Homologous_superfamilyLysM domain superfamilyInterproscan
IPR018392
all species →		DomainLysM domainInterproscan
IPR045030
all species →		FamilyLysM and putative peptidoglycan-binding domain-containing protein 1-4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20932
all species →		LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for CAB4025528.1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4025528.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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