Detailed information of CAB4025562.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4025562.1, Ubiquitin carboxyl-terminal hydrolase BAP1 [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4025562.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C4A0D9Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae OX=7739 GN=BAP1 PE=3 SV=1
Q66JB6Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis OX=8364 GN=bap1 PE=2 SV=1
Q52L14Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis OX=8355 GN=bap1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004546 (this species only)
Ubiquitin familyDUB|UCH|UCH · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01088
all species →		Peptidase_C12Ubiquitin carboxyl-terminal hydrolase, family 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001578
all species →		DomainPeptidase C12, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR036959
all species →		Homologous_superfamilyPeptidase C12, ubiquitin carboxyl-terminal hydrolase superfamilyInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10589
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4025562.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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