Genomic Location: not available for this species
NR annotation: CAB4025621.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4025621.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| O61491 | Flotillin-1 OS=Drosophila melanogaster OX=7227 GN=Flo1 PE=2 SV=1 |
| Q08DN8 | Flotillin-1 OS=Bos taurus OX=9913 GN=FLOT1 PE=2 SV=1 |
| O75955 | Flotillin-1 OS=Homo sapiens OX=9606 GN=FLOT1 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001682 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01145 all species → | Band_7 | SPFH domain / Band 7 family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036013 all species → | Homologous_superfamily | Band 7/SPFH domain superfamily | Interproscan |
| IPR027705 all species → | Family | Flotillin family | Interproscan |
| IPR001107 all species → | Domain | Band 7 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13806 all species → | FLOTILLIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0002090 all species → | Biological Process | regulation of receptor internalization | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0016600 all species → | Cellular Component | flotillin complex | Interproscan |
| GO:0031410 all species → | Cellular Component | cytoplasmic vesicle | Interproscan |
| GO:0045807 all species → | Biological Process | positive regulation of endocytosis | Interproscan |
| GO:0070528 all species → | Biological Process | protein kinase C signaling | Interproscan |
| GO:0072659 all species → | Biological Process | protein localization to plasma membrane | Interproscan |
| GO:1901890 all species → | Biological Process | positive regulation of cell junction assembly | Interproscan |
| GO:2000049 all species → | Biological Process | positive regulation of cell-cell adhesion mediated by cadherin | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K07171 | mazF, ndoA, chpA; mRNA interferase MazF | EC:3.1.-.- | Prokaryotic defense system | ko02048 | deepkoala |
Transcript abundance of CAB4025621.1 across 21 RNA-seq samples of Paramuricea clavata. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 4 | 22.50 | 57.97 | |
| apical branchlet · Temperature treatment at T0 | 6 | 4 | 8.17 | 14.72 | |
| apical branchlet · Temperature treatment at T25 | 5 | 1 | 3.62 | 18.12 | |
| apical branchlet · Control at T0 | 4 | 1 | 4.72 | 18.87 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
