Gene detail

Detailed information of CAB4025884.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4025884.1, Retrovirus-related Pol poly from transposon [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P31623	Gag-Pro-Pol polyprotein OS=Sheep pulmonary adenomatosis virus OX=11746 GN=pol PE=3 SV=2
P12894	Intracisternal A-particle Pol-related polyprotein (Fragment) OS=Mouse intracisternal a-particle IL3 OX=11754 PE=3 SV=1
P63136	Endogenous retrovirus group K member 25 Pol protein OS=Homo sapiens OX=9606 GN=ERVK-25 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan