Detailed information of CAB4026197.1 in Paramuricea clavata

Genomic Location: pcla8_s014842:7737...10380
NR annotation: CAB4026197.1, DNA-directed RNA polymerase II subunit RPB7 [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0104436 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03876
all species →
SHS2_Rpb7-NSHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005576
all species →
DomainRNA polymerase Rpb7-like , N-terminalInterproscan
IPR045113
all species →
FamilyRNA polymerase subunit Rpb7-likeInterproscan
IPR036898
all species →
Homologous_superfamilyRNA polymerase Rpb7-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12709
all species →
DNA-DIRECTED RNA POLYMERASE II, IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0006352
all species →
Biological ProcessDNA-templated transcription initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4026197.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP