Gene detail

Detailed information of CAB4026266.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4026266.1, RNA-directed DNA polymerase from transposon X-element [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P27117	Ornithine decarboxylase OS=Bos taurus OX=9913 GN=ODC1 PE=2 SV=1
P00860	Ornithine decarboxylase OS=Mus musculus OX=10090 GN=Odc1 PE=1 SV=2
P27119	Ornithine decarboxylase OS=Mus pahari OX=10093 GN=Odc1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00278	Orn_DAP_Arg_deC	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	Domain	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF02784	Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR009006	Homologous_superfamily	Alanine racemase/group IV decarboxylase, C-terminal	Interproscan
IPR022643	Domain	Orn/DAP/Arg decarboxylase 2, C-terminal	Interproscan
IPR002433	Family	Ornithine decarboxylase	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR000183	Family	Ornithine/DAP/Arg decarboxylase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR022644	Domain	Orn/DAP/Arg decarboxylase 2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004586	Molecular Function	ornithine decarboxylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006596	Biological Process	polyamine biosynthetic process	Interproscan
GO:0033387	Biological Process	putrescine biosynthetic process from ornithine	Interproscan