Genomic Location: not available for this species
NR annotation: CAB4026540.1, dihydroxyacetone phosphate acyltransferase-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4026540.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| G1SPE9 | Dihydroxyacetone phosphate acyltransferase OS=Oryctolagus cuniculus OX=9986 GN=GNPAT PE=1 SV=2 |
| A4IF87 | Dihydroxyacetone phosphate acyltransferase OS=Bos taurus OX=9913 GN=GNPAT PE=2 SV=1 |
| O15228 | Dihydroxyacetone phosphate acyltransferase OS=Homo sapiens OX=9606 GN=GNPAT PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005941 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF19277 all species → | GPAT_C | Glycerol-3-phosphate acyltransferase C-terminal region | Family | Interproscan |
| PF01553 all species → | Acyltransferase | Acyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR045520 all species → | Domain | GPAT/DHAPAT, C-terminal domain | Interproscan |
| IPR022284 all species → | Family | Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase | Interproscan |
| IPR002123 all species → | Domain | Phospholipid/glycerol acyltransferase | Interproscan |
| IPR041728 all species → | Domain | GPAT/DHAPAT, acyltransferase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12563 all species → | GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004366 all species → | Molecular Function | glycerol-3-phosphate O-acyltransferase activity | Interproscan |
| GO:0005778 all species → | Cellular Component | peroxisomal membrane | Interproscan |
| GO:0006631 all species → | Biological Process | fatty acid metabolic process | Interproscan |
| GO:0008374 all species → | Molecular Function | O-acyltransferase activity | Interproscan |
| GO:0008611 all species → | Biological Process | ether lipid biosynthetic process | Interproscan |
| GO:0008654 all species → | Biological Process | phospholipid biosynthetic process | Interproscan |
| GO:0016287 all species → | Molecular Function | glycerone-phosphate O-acyltransferase activity | Interproscan |
| GO:0019432 all species → | Biological Process | triglyceride biosynthetic process | Interproscan |
| GO:0031966 all species → | Cellular Component | mitochondrial membrane | Interproscan |
| GO:0044255 all species → | Biological Process | obsolete cellular lipid metabolic process | Interproscan |
| GO:0016746 all species → | Molecular Function | acyltransferase activity | Interproscan |
CAB4026540.1.Transcript abundance of CAB4026540.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
