Detailed information of CAB4027998.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4027998.1, 50 kDa hatching enzyme-like [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P52176Matrix metalloproteinase-9 OS=Bos taurus OX=9913 GN=MMP9 PE=2 SV=1
P07152Stromelysin-2 OS=Rattus norvegicus OX=10116 GN=Mmp10 PE=2 SV=1
P14780Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01549ShKShK domain-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR003582DomainShKT domainInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

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