Detailed information of CAB4028342.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4028342.1, transport Sec24C-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families

 Sequence
No sequence record for CAB4028342.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P53992Protein transport protein Sec24C OS=Homo sapiens OX=9606 GN=SEC24C PE=1 SV=3
O94855Protein transport protein Sec24D OS=Homo sapiens OX=9606 GN=SEC24D PE=1 SV=2
Q9M291Protein transport protein SEC24 B OS=Arabidopsis thaliana OX=3702 GN=SEC24B PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003759 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00626
all species →		GelsolinGelsolin repeatDomainInterproscan
PF04815
all species →		Sec23_helicalSec23/Sec24 helical domainDomainInterproscan
PF08033
all species →		Sec23_BSSec23/Sec24 beta-sandwich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036175
all species →		Homologous_superfamilySec23/Sec24 helical domain superfamilyInterproscan
IPR029006
all species →		Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR007123
all species →		DomainGelsolin-like domainInterproscan
IPR036180
all species →		Homologous_superfamilyGelsolin-like domain superfamilyInterproscan
IPR006900
all species →		DomainSec23/Sec24, helical domainInterproscan
IPR050550
all species →		FamilySEC23/SEC24 family, SEC24 subfamilyInterproscan
IPR012990
all species →		DomainSec23/Sec24 beta-sandwichInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13803
all species →		SEC24-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030127
all species →		Cellular ComponentCOPII vesicle coatInterproscan
GO:0000149
all species →		Molecular FunctionSNARE bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0070971
all species →		Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110
all species →		Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4028342.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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