Genomic Location: not available for this species
NR annotation: CAB4028438.1, patched domain-containing 2, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4028438.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| B9U3F2 | Protein dispatched homolog 3 OS=Gallus gallus OX=9031 GN=DISP3 PE=1 SV=1 |
| A3KFU9 | Protein dispatched homolog 3 OS=Mus musculus OX=10090 GN=Disp3 PE=2 SV=1 |
| Q9P2K9 | Protein dispatched homolog 3 OS=Homo sapiens OX=9606 GN=DISP3 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007833 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00040 all species → | fn2 | Fibronectin type II domain | Domain | Interproscan |
| PF02460 all species → | Patched | Patched family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000731 all species → | Domain | Sterol-sensing domain | Interproscan |
| IPR013806 all species → | Homologous_superfamily | Kringle-like fold | Interproscan |
| IPR000742 all species → | Domain | EGF-like domain | Interproscan |
| IPR042480 all species → | Family | Protein dispatched homolog 3 | Interproscan |
| IPR000562 all species → | Domain | Fibronectin type II domain | Interproscan |
| IPR036943 all species → | Homologous_superfamily | Fibronectin type II domain superfamily | Interproscan |
| IPR003392 all species → | Family | Protein patched/dispatched | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46687 all species → | PROTEIN DISPATCHED HOMOLOG 3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K24683 | DISP3, PTCHD2; protein dispatched 3 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Transcript abundance of CAB4028438.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
