Detailed information of CAB4030297.1 in Paramuricea clavata

Genomic Location: pcla8_s018007:3204...7795
NR annotation: CAB4030297.1, 250-270 copies of a 13 AA repeat, NSSTPITSSSIL, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O55187E3 SUMO-protein ligase CBX4 OS=Mus musculus OX=10090 GN=Cbx4 PE=1 SV=2
O00257E3 SUMO-protein ligase CBX4 OS=Homo sapiens OX=9606 GN=CBX4 PE=1 SV=3
Q9QXV1Chromobox protein homolog 8 OS=Mus musculus OX=10090 GN=Cbx8 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR043531FamilyE3 SUMO-protein ligase CBX4Interproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46727E3 SUMO-PROTEIN LIGASE CBX4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0032183Molecular FunctionSUMO bindingInterproscan
GO:0035102Cellular ComponentPRC1 complexInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0061665Molecular FunctionSUMO ligase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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