Detailed information of CAB4030711.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4030711.1, Transcription elongation factor SPT6 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7KZ85Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2
Q62383Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2
Q8UVK2Transcription elongation factor SPT6 OS=Danio rerio OX=7955 GN=supt6h PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14633SH2_2SH2 domainDomainInterproscan
PF17674HHH_9HHH domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035018DomainSpt6, SH2 domain, C terminusInterproscan
IPR035019DomainSpt6, SH2 domain, N terminusInterproscan
IPR000980DomainSH2 domainInterproscan
IPR035420DomainSpt6, SH2 domainInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR041692DomainHHH domain 9Interproscan
IPR042066Homologous_superfamilySpt6, Death-like domainInterproscan
IPR003029DomainS1 domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR017072FamilyTranscription elongation factor Spt6Interproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

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