Gene detail

Detailed information of CAB4031018.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4031018.1, probable E3 ubiquitin- ligase ARI3 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q3E7K8	Polyubiquitin 12 OS=Arabidopsis thaliana OX=3702 GN=UBQ12 PE=3 SV=1
P62972	Polyubiquitin (Fragment) OS=Xenopus laevis OX=8355 PE=1 SV=2
P0CG83	Polyubiquitin (Fragment) OS=Hordeum vulgare OX=4513 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031127	Family	E3 ubiquitin ligase RBR family	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR019956	Domain	Ubiquitin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0031624	Molecular Function	ubiquitin conjugating enzyme binding	Interproscan
GO:0032436	Biological Process	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan