Gene detail

Detailed information of CAB4031170.1 in Paramuricea clavata

Genomic Location: pcla8_s018763:2707...4704
NR annotation: CAB4031170.1, kelch 40a [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-PACLA_8A003638

TAATTTTTGGGCTACTAGGTTCCTCTCAGTTCTGTTCTTTGCATCTATCTGTAGCGAAATATGAGTACTGGTAGTCAAAACTCAGACAACGTTTTTTCCCAACGATGGAACGACAGCGATGTAGTGTTGGTAGTTGAAGGCAAAGAAGTTCATGTTCATCGCTATATGTTGTCAATGCAATCCCCAGTGTTCAAGGCGATGTTCAACGGCAATTTCAAGGATTCAAAACAAGAGAAGATCGAGCTAAAAGATGATAAATATGAAACGATGTTGCTATTCCTTCAACTATTATATCCACCGAACATGCTGGATGAGAATAAAAGCGATGTAGATATCAACgatgaaaatattttacaaattcttgAAGTTGCCGATAAATACACAGCTATTAATATCATAAAGCAATGTATGAAAGAAGCTGAGAACCTTGAACCAGAGATTACAATGCGTCTACTTCCTTATGCCTCACGACATGATTTACCACTGGACGAAATACTTGAAGTCATTGGCACAGAGGTATCAACAAAGGAGTTAGAAAATTATGCTCCAGAACTTGGTGATGACCGTCTTTACATCCAGACATTGGTGAAAAAATGTCACTCTCTAGAGAAACTTGCGAAGCAGGCTTATACCCTGGTTCTCTTCATGTTGGATAGGCACTTTAAAAACGGTTTCATGGATAAGTCAGTCAGGTGTTCTTTTCACGGAGTTGTCAATGCAACAGGAAGTTTTGAAAAGATCAGGAATTGCCGCCGTTGTTTGAAAGCTTACCAGAAATTTATCAACAAATGCGTGTTCTCTCATGATTCCGAAAGACCATTATTTATCCATTTTGAAAGTTCTCGTTTGAGCTGCTTGGATTTTGTGGATTTCCTTAAAACCGTAGGGAACATTGAGACTAGTGTATAATTTACATCGCTTGACTTAATTTTTggaccggtgtcacaggagattcgcccccccccccaggagatttgcccccctctcaaaaggggggtgatattcctaggatattcccCCCTCCCAgggcgaatttcctaggaatatcgcccccccccctggggggggggcgaatctcctaggaatattgccccctttaggaatttcgcccccccctcccatataaattttgaattttttatctaaaaacaaaacgattgcaatttgaaaagatttattgtgtgatttatttatttattacaaggagacaaaatatACCAACTCATCACACATGTAGTATACTATAATAATTTAATCCAAAAATCcaacttagactagtgtcatattctacacatctaaagtgaaccattgcccacagagatcgcataaaatcatgtcgtattcttctggcagtttacattcacataacatattataaaaacaatcacttgcaaattttatcaatatcagtgttaacaatagccgccacagtaatcacttgctaacaataaactataggattaataaaaaatctatggaatgtgttgggaagcgtattggctattgtccgttgaatcatcaactttccatgtcagtgttagtgatgtaatcttgattcttgacttccgcaaagaaaattgtattatatatatatgtggtgtggtttattcaaataatttcatgatactttgattttattagtgccttaaacatttgaaaatGTAACTCTGTAAAACCCTGgtaaaactaaaagcttttttgtcttttttgaaacgtatattattggagtattgcctattggcaagttctaccctttgcttctgagatttacaaactatattgaaataatgcaagtaaaaaatagtgacaacttataagccatacattttccgataacgacaaaacgtggatgcaaaaccaAATGccatgccgatcattgatcggttgttatttcaagctctgtcttaacaactTTGAATTGATATtgatttcaaattattaaagccatgtaattgttatcccatgcaactgttaggaagggcgaaattttgaacggag

Protein

Uniprot

Gene family

Uniprot term	Description
Q9XWB9	BTB and MATH domain-containing protein 36 OS=Caenorhabditis elegans OX=6239 GN=bath-36 PE=4 SV=1
B7U179	ARMADILLO BTB ARABIDOPSIS PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ABAP1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22744	HELIX LOOP HELIX PROTEIN 21-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan