Genomic Location: not available for this species
NR annotation: CAB4031281.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4031281.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006931 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07200 all species → | Mod_r | Modifier of rudimentary (Mod(r)) protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR037202 all species → | Homologous_superfamily | ESCRT assembly domain | Interproscan |
| IPR009851 all species → | Domain | Modifier of rudimentary, Modr | Interproscan |
| IPR029012 all species → | Homologous_superfamily | Helix hairpin bin domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13678 all species → | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000813 all species → | Cellular Component | ESCRT I complex | Interproscan |
| GO:0006612 all species → | Biological Process | protein targeting to membrane | Interproscan |
| GO:0006623 all species → | Biological Process | protein targeting to vacuole | Interproscan |
| GO:0043162 all species → | Biological Process | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K12185 | VPS37; ESCRT-I complex subunit VPS37 | - | Exosome | ko04147 | deepkoala |
Transcript abundance of CAB4031281.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
