Gene detail

Detailed information of CAB4031680.1 in Paramuricea clavata

Genomic Location: :...
NR annotation: CAB4031680.1, probable ATP-dependent RNA helicase DHX40, partial [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8IX18	Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens OX=9606 GN=DHX40 PE=1 SV=2
Q5R864	Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii OX=9601 GN=DHX40 PE=2 SV=1
Q5XI69	Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus OX=10116 GN=Dhx40 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04408	HA2_N	Helicase associated domain (HA2), winged-helix	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF21010	HA2_C	Helicase associated domain (HA2), ratchet-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048333	Domain	Helicase associated domain (HA2), winged-helix domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR002464	Conserved_site	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR007502	Domain	Helicase-associated domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18711	DHX40; ATP-dependent RNA helicase DHX40	EC:5.6.2.6	Messenger RNA biogenesis	ko03019	deepkoala