Genomic Location: not available for this species
NR annotation: CAB4031724.1, trafficking particle complex subunit 11-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families
CAB4031724.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| A6QLC7 | Trafficking protein particle complex subunit 11 OS=Bos taurus OX=9913 GN=TRAPPC11 PE=2 SV=1 |
| Q5ZI89 | Trafficking protein particle complex subunit 11 OS=Gallus gallus OX=9031 GN=TRAPPC11 PE=2 SV=1 |
| Q1RLX4 | Trafficking protein particle complex subunit 11 OS=Danio rerio OX=7955 GN=trappc11 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003086 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF11817 all species → | Foie-gras_1 | Foie gras liver health family 1 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR021773 all species → | Domain | Trafficking protein particle complex subunit 11 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14374 all species → | FOIE GRAS | Interproscan |
CAB4031724.1. This gene does have a gene model — the search simply returned no hit.CAB4031724.1.Transcript abundance of CAB4031724.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| apical branchlet · Control at T25 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T0 | 6 | 0 | 0.00 | 0.00 | |
| apical branchlet · Temperature treatment at T25 | 5 | 0 | 0.00 | 0.00 | |
| apical branchlet · Control at T0 | 4 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM,
StringTie quantification over 21 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
