Genomic Location: pcla8_s019650:3579...6051
NR annotation: CAB4032076.1, la-related 6-like [Paramuricea clavata]
Species abbreviation PCLAV · all data for this species · gene families
| CDS |
| PACLA_8A053929 |
| Transcript |
| rna-PACLA_8A053929 |
| Protein |
| CAB4032076.1 |
| UniProt accession | Description |
|---|---|
| Q9BRS8 | La-related protein 6 OS=Homo sapiens OX=9606 GN=LARP6 PE=1 SV=1 |
| Q8BN59 | La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 SV=1 |
| Q7ZWE3 | La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008657 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05383 all species → | La | La domain | Domain | Interproscan |
| PF12901 all species → | SUZ-C | SUZ-C motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006630 all species → | Domain | La-type HTH domain | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR024642 all species → | Domain | SUZ-C domain | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR002344 all species → | Family | Lupus La protein | Interproscan |
| IPR000504 all species → | Domain | RNA recognition motif domain | Interproscan |
| IPR036390 all species → | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR045180 all species → | Family | La domain containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22792 all species → | LUPUS LA PROTEIN-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006396 all species → | Biological Process | RNA processing | Interproscan |
| GO:1990904 all species → | Cellular Component | ribonucleoprotein complex | Interproscan |
| GO:0003729 all species → | Molecular Function | mRNA binding | Interproscan |
| GO:0005844 all species → | Cellular Component | obsolete polysome | Interproscan |
CAB4032076.1.
