Detailed information of CAB4032083.1 in Paramuricea clavata

Genomic Location: not available for this species
NR annotation: CAB4032083.1, atrial natriuretic peptide receptor 1-like, partial [Paramuricea clavata]
Species Paramuricea clavata · all data for this species · gene families

 Sequence
No sequence record for CAB4032083.1 in PCLAV (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7JQ32Receptor-type guanylate cyclase Gyc76C OS=Drosophila melanogaster OX=7227 GN=Gyc76C PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0050316 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094
all species →
ANF_receptorReceptor family ligand binding regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000337
all species →
FamilyGPCR, family 3Interproscan
IPR001828
all species →
DomainReceptor, ligand binding regionInterproscan
IPR028082
all species →
Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR052612
all species →
FamilyAtrial Natriuretic Peptide Clearance ReceptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44755
all species →
NATRIURETIC PEPTIDE RECEPTOR 3-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004930
all species →
Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186
all species →
Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0017046
all species →
Molecular Functionpeptide hormone bindingInterproscan
GO:0038023
all species →
Molecular Functionsignaling receptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for CAB4032083.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of CAB4032083.1 across 21 RNA-seq samples of Paramuricea clavata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

21Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
apical branchlet · Control at T25 6 0 0.00 0.00
apical branchlet · Temperature treatment at T0 6 0 0.00 0.00
apical branchlet · Temperature treatment at T25 5 0 0.00 0.00
apical branchlet · Control at T0 4 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (PCLAV_TPM, StringTie quantification over 21 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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